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PI

Dr. Esra Mine Ünal

#eDNA #MolecularEcology #AquaticPlants #InvasiveSpecies #DNABarcoding #PopulationGenetics #Tracking #Metabarcoding #GenomicBiomonitoring #Bioinformatics

Esra conducts research in molecular ecology and evolutionary genetics at Ankara University's Evolutionary Genetics Laboratory (eGL) and AgriGenomics Hub: Animal and Plant Genomic Research Innovation Center (AgriGx). As the PI and General Manager of AgriGenomics Hub, she leads laboratory management, project development, the implementation of high-throughput sequencing technologies, and the design of bioinformatics workflows.

Ünal, who completed his undergraduate and graduate studies in the field of aquaculture and his doctorate in biotechnology, focused on the integration of next-generation sequencing (NGS) technologies into biological monitoring processes, the creation of a local reference database, and the development of a holistic bioinformatics analysis pipeline in his doctoral thesis.


His research focuses on the genomic monitoring of invasive, rare, and economically/ecologically important species in aquatic and terrestrial ecosystems; the integration of DNA barcoding and metabarcoding methods into environmental biomonitoring; species verification and traceability in plant and animal-derived products; genomic assessment of ballast water-derived bioinvasion risks; and the characterization of microbial communities and resistance genes in archaeological settings. Within this scope, he has numerous publications in internationally indexed journals in the fields of environmental DNA, invasive species ecology, ecogenomic applications, and food verification.


Ünal specializes in DNA barcoding, eDNA metabarcoding, gene expression, population genetics, phylogenetics, next-generation sequencing, and bioinformatics analysis; and plays an active role in the design and implementation of automated DNA/RNA isolation, library preparation, and laboratory quality control processes. He has strengthened international collaborations through postdoctoral research in Brazil and Norway; and provides training to academia and the private sector on molecular genetics and environmental genomics applications.


With its experience in team management, project coordination, and the implementation of innovative genomic solutions at both laboratory and company levels, it continues to contribute to the development of ecogenomics and biomonitoring fields in Türkiye.

Other Projects


Continuing


• Development of a Field-Type PCR Kit for Detecting Invasive Species in Aquatic Ecosystems

Role: Researcher Supported by: TÜBİTAK (Application in progress)


• Biodiversity Determination of the Class Aves in Aquatic Ecosystems Using Environmental DNA Metabarcoding Method

Role: Project Manager Supported by: TÜBİTAK (Application Stage)


• Detection of Novel Antibiotic Resistance Genes in the Antarctic Peninsula Using Shutgun Metagenomic Methods

Role: Researcher Supported by: BAP (Application Stage)


• Network for Deciphering Life Through Environmental DNA Metabarcoding of Intersecting Ecosystems in Key Biodiversity Areas (DecipherLife-Net) (Application Phase)

Role: Researcher Supported by: European Biodiversity Partnership, Biodiversa+


• Development of Genomic Laboratory Applications and Bioinformatics Workflows with Artificial Intelligence and Machine Learning

Role: Project Assistant Supported by: AgriGenomik Hub Laboratory Biomedical Inc.


• BIOSCAN

Role: Researcher Supported by: International Barcode of Life (iBOL) (2019-2027)


• TR.AQUA: Innovative and Sustainable Practices in Aquaculture within the Framework of Food Supply Security (2023-Ongoing)

Role: Project Coordinator Supported by: TÜBİTAK


• Blue Genome: Investigating the Microbiota-Transcriptome Relationship within the Scope of Sustainable Aquaculture and Food Biotechnology

Role: Researcher Supported by: Ankara University, Research Universities Support Program (ADEP)

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Ankara University, Faculty of Agriculture, Department of Fisheries Engineering, Subayevleri, 06120 Keçiören/Ankara

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